Package ‘ GeneSelectMMD ’ April 25 , 2017
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چکیده
April 25, 2017 Type Package Title Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions Version 2.20.0 Date 2012-11-14 Author Jarrett Morrow , Weiliang Qiu , Wenqing He , Xiaogang Wang , Ross Lazarus . Maintainer Weiliang Qiu Depends R (>= 2.13.2), Biobase Imports Biobase, MASS, graphics, stats, survival, limma Suggests ALL Description Gene selection based on a mixture of marginal distributions License GPL (>= 2) biocViews DifferentialExpression NeedsCompilation yes
منابع مشابه
Package ‘ GeneSelectMMD ’ January 14 , 2017
January 14, 2017 Type Package Title Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions Version 2.18.0 Date 2012-11-14 Author Jarrett Morrow , Weiliang Qiu , Wenqing He , Xiaogang Wang , Ross Lazarus <r...
متن کاملGene Selection Using GeneSelectMMD
This document demonstrates how to use the GeneSelectMMD package to detect significant genes and to estimate false discovery rate (FDR), false non-discovery rate (FNDR), false positive rate (FPR), and false negative rate (FNR), for a real microarray data set based on the method proposed by Qiu et al. (2008). It also illustrates how to visualize the fit of the model proposed in Qiu et al. (2008) ...
متن کاملPackage ‘ GeneSelectMMD ’
August 2, 2013 Type Package Title Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions Version 2.5.0 Date 2012-11-14 Author Jarrett Morrow , Weiliang Qiu , Wenqing He , Xiaogang Wang , Ross Lazarus <ross...
متن کاملPackage ‘ iASeq ’
April 25, 2017 Type Package Title iASeq: integrating multiple sequencing datasets for detecting allele-specific events Version 1.20.0 Date 2012-02-13 Author Yingying Wei, Hongkai Ji Maintainer Yingying Wei Description It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across stud...
متن کاملPackage ‘ bridge ’ April 25 , 2017
April 25, 2017 Title Bayesian Robust Inference for Differential Gene Expression Version 1.40.0 Author Raphael Gottardo Description Test for differentially expressed genes with microarray data. This package can be used with both cDNA microarrays or Affymetrix chip. The packge fits a robust Bayesian hierarchical model for testing for differential expression. Outliers are modeled explicitly using ...
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